Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015791789.1_cds_XP_016508936.1_2123
CDS Infomation	[gene=LOC107826465] [db_xref=GeneID:107826465] [protein=small subunit processome component 20 homolog] [protein_id=XP_016508936.1] [location=join(9258..9326,10642..10764,11512..11669,12459..12503,13087..13165,13264..13337,13513..13619,15148..15330,15703..15906,15979..16195,16280..16354,16501..16832,17159..17357,17450..17702,17772..18111,18280..18460,18567..18707,18823..19084,19203..19616,20197..20660,22639..22775,22875..23056,23140..23496,23778..23903,24920..24985,25073..26880,26966..27245,27535..27768,29486..29998,30163..30325,30736..30989)] [gbkey=CDS]
Sequence	ATGGCAACTGCTTCAGATGCCTACGCTGTTAAATCTCTCAACAAATCCCCTGGTCGCCGC CGCTTTACTTTCAAGACATTTTCGGAGCGGATTGAAGATGTTGAAGTTGATGTGTACAGA AGTCTTGACCCTTTAAAAGCTGAGCCGTCTGAAGGTTCCTCCTTCTTCCGGGATTGCCTT GTGGAATGGAGAGAATTAAACACTGCCGAGGATTTTATTTCATTTTACGAGGAAATATTT CCCTTGGTACAGACGCTACCACAAATTATACTGCACAAAGAACAGATAGTCGCAAAACTT CTTTCAAGGTTGGACATGAAAGGGAGACTATCCCTTGAGCCAATCCTCAGGTTAATTGCA GCCCTATCTAGAGATCTCCTGGAGGACTTCTTACCCTTTCTCCAGAGGATTGCTGACTCT TTAGCGTGTCTTCTCAAAAGTGGTGCTGATAGAGAACCAGATATAATTGAGCAGATTTTC AAATCGTGGTCTTTTATTATGATGTACCTGCAGAAATATCTTGTTAAAGATGTTGTTGAT GTTCTGAAGGTAACAGTAAAATTAAGATACTATTCCAAGGAGTACGTCCACGAATTTATG GCTGACTCAATATCATTCATATTGAGGAATGCTCCTGTTAAGCAGCTTATAAAAGGGGTG AGGAAGCTTATGTTTGAAGTTGCGAAGAAACCATTGGAAATAAGAAAATCCGCTGTCAGT TCATTGTTGTGGTATGTTGTTAGAGGAAGCTCCTCAAGGTTACACTCAAGGGCTGAACAA GTGTTACGCCTACTGATTGACAAGTCTCTGTTTGTTATAGGTGATCAGTTCTCCGGGGGT GCTGAGACCATCCTTGAAGTTCTTGTTCTAGCACTGCAGAGGTTATGTGCGGAGTTAGAA GCTTCAGAGTTGGAGTTGATGTGGGCTTGCTTATATGAGGAGATAACTGAGTGTGTATCT CAAGGCCACCTATTGCACCTTGGTCGCCTTTTGTCCCTTCTTGCTTCTACCCTGCAAGCT AGTTACATTCGGAAAATTTCTGATTACCAAGGGGTGCTTCAATTGATCCAGTTGATTGTA CAGACTTACATTCTGCCTTATCCTATTGTGAAGGCAATTGATCAAACATCAATCATTGTT GAAAAAGCTTTACAGTCAATGCTTTGCATTCTTGATGGTCTATATAGAGCTAATAATATT TCTGCTCTCTCTTCTGTTTCGATGCAATGGGCTCCTGTGTTTGATTTAAGGAATAAGAGT TTGTTGTCTTTTATCGGAGATCTTCTATTTAAGGACCCTTGCATTGTCCAGTTCTTCAGA GCTAGCATTATAAGTGCATTAAATGATATGATAGAGATGTCAGAGGAAGAGGTTATACAT TTGCTGCAGATCTTTGTTAAGAGGCTTCCAGCACAAGGACATAGCTTCTTGGATGAGGTT CCAAAAGAGAAGCTTTCAAGAATTCACAATTTTCTCCAAGAAGCCATCGTTCGTTGGATT CAGCGGATACAGAAGGAACCATATTCTACCCAAATTGGAGAAAATGAGTTAGCCATACTG TGGGGAGTCATTGGCTGTTATCCGTATGTAGTAGGTGCTTCAGCGAATGAGTCATTGCTA ATAGACTTGGTTAATGCTTTAGATGAGCTTTTGAGTACTGAATCTGCTGACATTGCTGGG CATCCTAGAACTACCTGGCAGAGCTTGGTTGGTGCTGCATTGGGTTCTTATTATAAGTCG CTGGCTAATCAAAATTCCAGATCTGATGATTCCATCATAAGCAGATTCTTAGATCTGTCA AGGAAGCACAAGACATGTTATCAAGTGTTGTCTCCAGTAGCTGATATTTTGGATTCAGTT TGTGGGTCCATAATCCAAGCTGATGCAAGCACTAAAAAATATCACCCGGAGCTGGTAGCG AGTAAGATGGTGGATGCCCTAGGCGCGTTTGCTGCAAATTTGAGCCATCCCGACAAGAAT ATGCGTCTTTCGACCTTAAGAATATTGTGCCACTACGAACCTTTGACTGATGTCAACTCT ATTAATGAACAACCCGTTGAGAAGAAAATGAGAATGGATAATCCTGAGACTACTCTTGTG GACTACCATGGCAATAATGTGATGCATCTCCTACTTTTGATTGAAGAAACGCCTCTTTCT ATTGCCACCAGTAGAAAGGTCATTCGACTGATTTCCAAAATACAGATGAGTCTATCTGCT GGACAGATAGCTGAAGAGTATATACCTGCTGTTCTTGATGGAATTATTGGAATCTTTCAT AGCCGTTTTAGCCATTTGTGGAACCCAACATTGGACTGCATAGCTGTCCTCCTCAGTCAA TATTTTGGGTTGCTGTGGGACAGATATATTGAGTACCTTGATCATTATCTGTCTGTTTTT CTTGGTTCTCATGATGAAGCTGCTCAAAGCAAGGAGGAATCATTAGAGACAGCTCATAAT TTGACTGGAAGCTTCAGGTCCTATGTCTGTCCGGTGTCTGAAACTGCGTCACGTGCAACA ATTTTTTCTTTATTGATTCAGTGTTTGCAGAAAATTCCATCTGTTGCTGAATCGCGTTCA CGACAAATCATACCTCTGTTCTTGAAGTTCCTAGGCTATAATATTGAAAATCTTGAGAGT GTGGAATTATACAATCCAGAGGGTTGTAAAGGGAAAGAGTGGAAAGACGTTCTTCAAGAA TGGTTGTCCTTATATAGACTGATGCGAAACCCTAGGTCTTTTTATCTCAATCAATTCTTC AAGGAGGTTTTACTATACAGACTTCTTGAGGAAGATGATGCTGACTTGCAAATTAAGGTC ATTGATTGCCTGTTAAATTGGAGAGATGACTTTTTAATTCCGTATGATCAGCATCTAAAA AATCTGATCAATTCAAAAAGTCTGAGGGAGGAGCTCACAACATGGAGCTTATCCAGGGAA TCAGATCTTGTTGATACAAGGCATAGAGTTTTCCTTGTGCCTGTTGTTATCAGAATACTG GCTCCAAAAGTCAGAAAGTTAAAGGCGCTCGCTTCTCGTAAGCATGCAAGTGTCCATCAT CGAAAGGCGATTCTTGGCTTCTTAACGCAGCTAGATGTTGAAGAGCTTCCTCTTTTCTTT GCCTTGCTGATAAAACCACTTATATCTGCTTCACAAGGTGCTGCAGCAAAGAGTGCACGG CTCTGGACAACACCTGAAACTCTAAAGCATGGGTTTGACTCATTTGGTGTCCTGGAGCAT TTTTCCAGAGATTGCATCAATGCCATTTCATGGAAGAAGAGATATGGTTTTCTGCATGTA ATCGAGGATATTGTAGCTGTTTTTGATGAAGTGCATATTAGCCCTTTTCTTGATCTGTTA ATGGGATGTATTGTACGCCTCTTGGAAAGCAGCACATCAACTCTTAAAGGCACAAGAAAT GAGGGGGGGCTAGCTGATCATGATCACCAAGTGGAGACAAACATAGTTGCAAAGCAGTCC AAGGATTTGAGATCTTTATGCCTGAAGATCATCTCTTTTATTCTTAGCAAATACGAAGAT CATGATTTCAGTTCTGAATTTTGGGATTTGTTCTTTATGTCAGTAAAACCTTTAGTTGCT AGTTTCAAACAGGAAGGTGCTAGTAGCGAGAAGCCAAGCTCGTTATTTTCTTGTTTTCTG GCTATGAGTAGAAGTTCCAAACTTGTGCCTCTGTTGTCCAGAGAAAAGAATCTTGTACCT GATATATTCTCGATGCTAGCAGTCTCAACAGCATCGGATGCCATCATTTCCTCTGTTCTT AAGTTCGTTGAGAATCTGTTGGATCTTGATATTGAGCTGGGTAATGAAGACAACCCTCTT AGGAGATTACTGCTTCCTCATGTTGATGTACTTGTATGCAGTTTGCATCGTCTTTTTGTA CATGATGGTGCGCAAAAGAGGAAGCTTGTCAGATATCCTGGGGAAAAAGAGTTCAATGTT TTCAAGCTGTTATCAAAGCAGATAAAGGAACCGTTGGCTGCAAGGAAGTTTCTTGATATC TTGCTTCCGCTTCTGTCAAAGAGATCCAATGACCCTGAGATTTGTGTAGGCACTTTACAG ATTATTAAGCATATTGTAGAGCCATTGGGTAGTGAGAGCAGTAAAAAGATCGTCAAATCA GTTTCTCCGCTCGTAATTTCTGCTGGCTTGGATGTTCGCACTTCTATTTGTGACGTTCTT GATGCTGTCGCAGCGAACGATTCTTCTATACATCCTGCGGCAAAACTTCTTCGCGAATTG AATGCCACGTCTATCGTGGAGTTGGGAGATCTTGATTATGATACTATAATTGCAGCTTAT GAAAAGATAAGTGCAGACTTTTTCCACACTGTCCCGGAAGAACATGCGTTGATTATTCTG TCACATGCTATACATGATATGTCGTCTGAGGATCTTATTTTGAGACAGAGTGCATATAGA TTATTGCTTTCGTTTGTCGAGTTTTCTAGTCAAGTGCTCGTTAGAAAGTTGAAATCTGAA CAAGAATCTTCTGGAGCCTGGGTTAGGCACATCCTAAGCAACTTCTTTTTGAAGCACATG GGTACTGCCATGAACAAAGAAGATTCAATTCAGAAGGTATGGATCGATCTACTTCGGGAT ATGGTCCTGAAGCTTCCAATGCTGGAAGACTTCAAATCATATGCAGTTCTTTTCAGTGAA GATCCAGAGCAGGACTTTTTTAACAATATTGTGCATTTGCAAAGACACAGGAGAGCAAGG GCTTTGTTACGATTTAGGAATGTCATCAGTTCTGGAAATTTCTCTAAGGTTCTCATAAAT AAAGTATTTATGCCGCTTCTTTTCAAAATGTTGCTTGATGGACAAGTTGGAAAGGGTGAA AATATTAGAAGTGCATGTTTGGAAGCTGTTGCATCAATTACTAGATGTATGGAGTGGCGA TTGTATTATGCGTTACTCAATAGATGCTTTCGGGAGATGACACTGAAACCAGATAAACAA AAGGTGTTATTGCGGTTAATAAGCTCCATTTTGGACCAGTTCCATTTTTCAGACACTCCT TCTGATCATGACACTGCAGATTCTGTGCAAGATATTCAAACTACTTGTTTGATAGAGTCA GGCAAAGTCACTGGCGTTTCTGAACTTGCGGAGATACAAATGTGCCTCCAAAAGGATATG CTTCCCAGGGTACAAAAAATGTTGATTGCTGATACTGATAATGTCAATGTAAACATCAGT CTAATTCTGCTTAAGTTGCTTAAGCTACTCCCTGGAGACATTATGGAAGTGCATCTTCCA TCTATAATCCATCGTGTAGCGAATTTCCTTAAGAATCGTTTGGAAAGTGTTCGTGATGAA GCCAGAGCTGCTTTGGCTGCTTGTTTAAAAGAACTAGGGCTGGAGTACTTGCAATTTGTT GTCAAAGTCTTGAGAGGCACTCTGAGGAGAGGATTCGAATTGCACGTTTTGGGGTTCACT CTCAATTTTCTACTATCAAAATTTCTTATAAATCCCAGTAGTGGGAGGTTGGATTATTGT TTAGAGGATCTTCTCTCGGTTGCAGTAAATGATATACTCAGTGATGTTTCGGAGGAGAAA GAGGTTGAGAAGATTGCTTCAAAGATGAAAGAGACTAGGAAGCAAAAGTCATACGATACC CTTAAATTGATTGCACAAAGTATCACGTTCAAAACACATGCTCTGAAGCTGCTTGCGCCA ATTATTAAGCATCTACAGAAGCAGCTGACTCCAAAAGTAAAATCAAAATTAGAGAACATG TTGTCTCATATAGCTGCTGGAATACAGCGTAATCCATCTGTAAACCAGACGGAACTCTTT ATCTTTGGATATGGTCTAATTAAAGATGGAGTAACAGATGAATCTCCTGGGCATGCAGAG ACATCGATTTCAATGGAAAGTAAGCAAAAGAAAGATGGAGTAAACAGCCAGATTGCTAAA TCAGATAAGTTGGTCAGCATTGATTCACGATATTCTCACCTTATTACCGAATTTGCTCTT GGAGTGCTTCAGAATTACATGAAGAACATGAAATTAGACAAGAAAGATGAGCAGTTGTTA TCAATGCTTGATCCATTTGTAAGATTATTGGGTGAATGCTTGAACTCAAAATATGAGAAT ATCATGTCTGCTTCACTTAGGTGCTTGTCTCCTATGGTGAGGCTTCCTTTGCCATCACTT GAATCTCAGGCGGAGAAGATAAAGAATTCGTTACTGAATATTGCTCAAGGTTCAGTAGCC TCCAGTAATCCATTGATGGAGTCATGTGTTAAGTTGCTAACAGTGCTTTTGCGTAGCACT AAGATCACACTTTCTACGGATCAACTGCATATGCTAATCCAGTTTCCGCTTTTTGTTGAT CTTGAAAGAAATCCCTCTTTTGTTGCTCTCTCACTGTTGAAAGCAATAGTGAGTAGGAAG TTGGTAGTTGCGGAAATCTATGATATAGTTAAACGTGTTGCAGAGTTGATGGTGACTAGT CAAGTTGAATCAATTCGTAAGAAATGCAGCCAAATTTTGCTGCAGTTTTTACTGGACTAC CACATCTCCGAGAAACGTCTGCAGCAGCATCTTGATTTCTTACTTTCGAATTTAAGATAT GAGCATTCGGCTGGGAGAGAAGCCATTCTTGAAATGCTTCATGCTATCATAATGAAATTC CCAGTTAGCATCATAGATGAACAATCTCAGATGTTTTTTCTGCATTTGGTGGTTTGTCTG GCGAATGATCGTGACAACAGAGTCCGTTCGATGACTGGTACTGTCATAAAGTTACTTATT GGACGAGTCAGTTCCCATTCACTCCAGTCAATTCTTGAGTTTAGTCGGTCCTGGTACCTG GGCGATAAACCACATTTGTGGAGTGCTGCAGCACAGATTTTGGGGTTACTCATTGAAGTG GTGAAGGATGGTTTCCAAAAGTATATTGATAGTCTCTTGCCTGTTTTGAGAAACATCTTG CGATCTGCAGTTAGTGTTCTTACAAATAAGCAAGTGGATCTACCCAATGATGCAACGGCT TCATCTTGGAAAGAAGCATATTATTCACTGGTTCTATTTGAGAAGATATTAAATCAATTT CCTAAGTTGTGCTTCAGAAAGGATCTTGAGGATCTGTGGGAAACAATCTGCGAGTTGCTT TTGCATCCGCATCTGTGGTTGCGCAACATATCAAACCGTCTTGTGGCTTGCTACTTTGCC TCCATGACCGAGGCTTGTAAAGAAAACCTTGAACTGCCTCAAGGAACTTACTTTTTGATG AGGCCAAGTAGACTTTTCTTTATAGCTACTTCTCTTTGCTGTCAACTGAAGGTGCTGCAG ACTGATGATGCTGCTAGTGATCTCATTACTCAAAATCTTGTCTTTTCAATTTGCGCTCTG CATTCATTCTTAGGAAAAAATGAATGTAAGCGTCAAAACAAGTTCTGGTCCACCATTGAA CATGATGAGCAGGGTCTTCTACTTAAGGCTTTTCAACAGCTTGATTCAAGGAAAGGGAAA AACATCTACTTATCTCTTGTGTCTGACCTTAGCGATCAAGAAGATGAAAACGAGCGGTAC TTGGTCATTTCCTATTTGCTTAAGACAATGGGAAAGATTTCCCTTCAGGTGGAAGATATG CAGATGAAAATTATCTTCAGTTGTTTCAAATCAATTTCACCAAAGCTTATAGATCAGAGT AGATTGTTGTCCCCTGAAGGTGAGGTTGATTCCCAAAGCTATGCATATCATATGCTGTTG CCGCTCTACAAAGTGTGTGAAGGATTTGCTGGAAAAGTTATTTCAGATGACGTGAAACAA CGGGCTGAAGAAGTGCGCGGAAGCATAAGCAATGTTATAGGAGTGCAGAGTTTCGTCCAA ATCTACAGTCATATAAGGAAGAATCTCAAATCCAAGAGGGATAAGAGGAAACAAGAAGAG AAGGTCATTGCCGTGGTGAATCCAATGAGAAATGCCAAGAGAAAGCTGAGGATCGCCGAA AAGCATAAAGCACACAAGAAAAGGAAAATGATGTCAATGAAGATGGGAAGATGGATGTAG

Peptide Sequence

PEP ID	XP_016508936.1
PEP Infomation	PREDICTED: small subunit processome component 20 homolog [Nicotiana tabacum]
Sequence	MATASDAYAVKSLNKSPGRRRFTFKTFSERIEDVEVDVYRSLDPLKAEPSEGSSFFRDCL VEWRELNTAEDFISFYEEIFPLVQTLPQIILHKEQIVAKLLSRLDMKGRLSLEPILRLIA ALSRDLLEDFLPFLQRIADSLACLLKSGADREPDIIEQIFKSWSFIMMYLQKYLVKDVVD VLKVTVKLRYYSKEYVHEFMADSISFILRNAPVKQLIKGVRKLMFEVAKKPLEIRKSAVS SLLWYVVRGSSSRLHSRAEQVLRLLIDKSLFVIGDQFSGGAETILEVLVLALQRLCAELE ASELELMWACLYEEITECVSQGHLLHLGRLLSLLASTLQASYIRKISDYQGVLQLIQLIV QTYILPYPIVKAIDQTSIIVEKALQSMLCILDGLYRANNISALSSVSMQWAPVFDLRNKS LLSFIGDLLFKDPCIVQFFRASIISALNDMIEMSEEEVIHLLQIFVKRLPAQGHSFLDEV PKEKLSRIHNFLQEAIVRWIQRIQKEPYSTQIGENELAILWGVIGCYPYVVGASANESLL IDLVNALDELLSTESADIAGHPRTTWQSLVGAALGSYYKSLANQNSRSDDSIISRFLDLS RKHKTCYQVLSPVADILDSVCGSIIQADASTKKYHPELVASKMVDALGAFAANLSHPDKN MRLSTLRILCHYEPLTDVNSINEQPVEKKMRMDNPETTLVDYHGNNVMHLLLLIEETPLS IATSRKVIRLISKIQMSLSAGQIAEEYIPAVLDGIIGIFHSRFSHLWNPTLDCIAVLLSQ YFGLLWDRYIEYLDHYLSVFLGSHDEAAQSKEESLETAHNLTGSFRSYVCPVSETASRAT IFSLLIQCLQKIPSVAESRSRQIIPLFLKFLGYNIENLESVELYNPEGCKGKEWKDVLQE WLSLYRLMRNPRSFYLNQFFKEVLLYRLLEEDDADLQIKVIDCLLNWRDDFLIPYDQHLK NLINSKSLREELTTWSLSRESDLVDTRHRVFLVPVVIRILAPKVRKLKALASRKHASVHH RKAILGFLTQLDVEELPLFFALLIKPLISASQGAAAKSARLWTTPETLKHGFDSFGVLEH FSRDCINAISWKKRYGFLHVIEDIVAVFDEVHISPFLDLLMGCIVRLLESSTSTLKGTRN EGGLADHDHQVETNIVAKQSKDLRSLCLKIISFILSKYEDHDFSSEFWDLFFMSVKPLVA SFKQEGASSEKPSSLFSCFLAMSRSSKLVPLLSREKNLVPDIFSMLAVSTASDAIISSVL KFVENLLDLDIELGNEDNPLRRLLLPHVDVLVCSLHRLFVHDGAQKRKLVRYPGEKEFNV FKLLSKQIKEPLAARKFLDILLPLLSKRSNDPEICVGTLQIIKHIVEPLGSESSKKIVKS VSPLVISAGLDVRTSICDVLDAVAANDSSIHPAAKLLRELNATSIVELGDLDYDTIIAAY EKISADFFHTVPEEHALIILSHAIHDMSSEDLILRQSAYRLLLSFVEFSSQVLVRKLKSE QESSGAWVRHILSNFFLKHMGTAMNKEDSIQKVWIDLLRDMVLKLPMLEDFKSYAVLFSE DPEQDFFNNIVHLQRHRRARALLRFRNVISSGNFSKVLINKVFMPLLFKMLLDGQVGKGE NIRSACLEAVASITRCMEWRLYYALLNRCFREMTLKPDKQKVLLRLISSILDQFHFSDTP SDHDTADSVQDIQTTCLIESGKVTGVSELAEIQMCLQKDMLPRVQKMLIADTDNVNVNIS LILLKLLKLLPGDIMEVHLPSIIHRVANFLKNRLESVRDEARAALAACLKELGLEYLQFV VKVLRGTLRRGFELHVLGFTLNFLLSKFLINPSSGRLDYCLEDLLSVAVNDILSDVSEEK EVEKIASKMKETRKQKSYDTLKLIAQSITFKTHALKLLAPIIKHLQKQLTPKVKSKLENM LSHIAAGIQRNPSVNQTELFIFGYGLIKDGVTDESPGHAETSISMESKQKKDGVNSQIAK SDKLVSIDSRYSHLITEFALGVLQNYMKNMKLDKKDEQLLSMLDPFVRLLGECLNSKYEN IMSASLRCLSPMVRLPLPSLESQAEKIKNSLLNIAQGSVASSNPLMESCVKLLTVLLRST KITLSTDQLHMLIQFPLFVDLERNPSFVALSLLKAIVSRKLVVAEIYDIVKRVAELMVTS QVESIRKKCSQILLQFLLDYHISEKRLQQHLDFLLSNLRYEHSAGREAILEMLHAIIMKF PVSIIDEQSQMFFLHLVVCLANDRDNRVRSMTGTVIKLLIGRVSSHSLQSILEFSRSWYL GDKPHLWSAAAQILGLLIEVVKDGFQKYIDSLLPVLRNILRSAVSVLTNKQVDLPNDATA SSWKEAYYSLVLFEKILNQFPKLCFRKDLEDLWETICELLLHPHLWLRNISNRLVACYFA SMTEACKENLELPQGTYFLMRPSRLFFIATSLCCQLKVLQTDDAASDLITQNLVFSICAL HSFLGKNECKRQNKFWSTIEHDEQGLLLKAFQQLDSRKGKNIYLSLVSDLSDQEDENERY LVISYLLKTMGKISLQVEDMQMKIIFSCFKSISPKLIDQSRLLSPEGEVDSQSYAYHMLL PLYKVCEGFAGKVISDDVKQRAEEVRGSISNVIGVQSFVQIYSHIRKNLKSKRDKRKQEE KVIAVVNPMRNAKRKLRIAEKHKAHKKRKMMSMKMGRWM

Transcript Sequence

Gene sequence data has not been registered.